Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838827.1_cds_XP_016507090.1_20252
CDS Infomation

[gene=LOC107824797] [db_xref=GeneID:107824797] [protein=putative disease resistance protein RGA4] [protein_id=XP_016507090.1] [location=join(14549..16375,16574..16624,16731..16750,17281..17410)] [gbkey=CDS]
Sequence

ATGACTCGCGTGTTTAATGTAGAGAAATTATTAAAACAAATTGTGAATTCAGTTAGAGAT
GATTTACGCGAGAGTCTTGATATGAATGAACTGCAGAATCTAGTTCGTGAGACTTTGTAT
GAAAAGAAGTATTTGCTTGTTTTAGATGATGTGTGGAATGAGGACACAATGAAGTGGGAT
GACTTGAAGAAATTGTTGATGGTGGGTGCTTTTGGAAGCAAGATTCTTGTGACTACGAGG
AATGAGGCAGTAGCTTCGATAATGGGGACGATTCCTGCATACTGTTTGAAGGGTTTATCA
AGTGAAGATTGTCTGACTGTGTTCTTGAGAAAGGCCTTTGAACAAGGTCAAGAAGTGCTA
TATCCAAATCTCGTCGGGATTGCATCAGATATAGTGCAGAATTGTGAGGGAAATCCCTTA
CTCTTAATGACTTTAGGATCTTCATTACACATGGAAACTAACGAATGGGAGTGGCATGAA
GTTAAAAATCATGAGATGTGGAACTCAAAGCAGAATGACAATATTTTACCTGCATTAAAA
GTGAGCTACGAGCGATTACCATCTAATCTAAAAGTTTGTCTTGCTTACTGCTCAGTATTT
CCCAAAGGCTGTGTGATTGAAATAGATAAACTGATACAGTTGTGGGTAGCAGAAGGTCTC
GTTAGTAAGTCTAATGAGTCAGAAGATCTTGAGCACATTGGGATTCAATATTTCCAAGAG
TTATTGTCGAGATCCTTTTTTCAAGACGTTGAAGAATATCGTTCTGTGTTTACCTCACTC
TGTAAATTGCATGACCTTGTACATGATCTTGCACTGTCAGCAGCAGGGGTTGAATTTTGT
ACCGTAAATTCTCACACGCAAATCATTTCTGATGAGGCCAGGCATGTGGCATTTTCTGAC
TATGATTTGTCAGCAGCGGAACTGCCAGCATCCCTTCTCAATAACCAGACATTGAGGACC
ATATCCTTCTCTGTTGATGGAGTAGGACCGATGAGTACAATGTTCATCGAGAACTGCATA
GCAAGATTCGTGCAACTTAGGGTGCTAGATATAAGTCATTCATGTTTCGATGAGCTGCCT
CGCTCTGTTGGCGAATTGAAGTACTTGAGATATCTTGACATAAATTCCAATGGCAGCATT
AAAGAATTACCTGATTCGATTAACAAGTTACTGAGCTTACAGACACTTCGACTTTCTCAT
TGTGCACAACTTGAAGGATTACCTAAAGATATAGGAAATTTGATCAGCCTAAGACACTTG
CATATAACCACCAAGCAAACATGTTTTCCTGATAAAGCAATTGGCTGTTTATCATCTCTT
CGTTCTTTGTATATTCATAGCTGCACGAATCTCGTATCTTTGTCTGAAGGCCTGCAATAT
CTGACTAGCCTTCGCACGTTGGCAATTATTGGTTGCCCAAGACTGACCTTTTTCCCAAGT
ACTATGAAACACCTTACTGCTCTGGAGAATCTGTTGATCGTTGACTGTGAAGAGCTTACA
TTGTTGGAGTGGCAAGATATTGAAGGACTTAGGATGATCCGGTCATTGGTTATTGGAGGC
TTACCCGAATTGGAGTCAAAAGATGTTCAACGCCTCGGGAACCTCCAGATGTTGGTGCTT
GCAGGGTTACCACAGTTAGTTGCTTTGCCCCGATGGCTTGAAGGTGCAAGTGCGACTCTA
CAGTACCTGAGGGTGGAAAGGTGTCCCAATTTTGCAGCATTGCCAAAGTGGCTGGAAAAT
CTAATCGCACTTGAAAAACTTGAAATTTCCAAGTGCGGTAAGTTATCTTCATTGCCCGAG
GGGATGAGTTGCCTCACGAACCTGAAGCCTTTTGCATCTGATAATCACGTAAAGCACGTG
GCGTCATCACAGCCAGAGCTAATAGAGCCCGGTAGTCTGTATACTCCTTCCAAGGAAAAG
CTCAAAGGATCAGGAAAGTTGATGGTACCATCAGATTTGGAACCAAGAGAATACATGATT
AAGCGGAAGGGGAGCCTTGACGTAACTGATAAAGTTACTGCCATGTGA

Peptide Sequence

PEP ID

XP_016507090.1
PEP Infomation

PREDICTED: putative disease resistance protein RGA4 [Nicotiana tabacum]
Sequence

MTRVFNVEKLLKQIVNSVRDDLRESLDMNELQNLVRETLYEKKYLLVLDDVWNEDTMKWD
DLKKLLMVGAFGSKILVTTRNEAVASIMGTIPAYCLKGLSSEDCLTVFLRKAFEQGQEVL
YPNLVGIASDIVQNCEGNPLLLMTLGSSLHMETNEWEWHEVKNHEMWNSKQNDNILPALK
VSYERLPSNLKVCLAYCSVFPKGCVIEIDKLIQLWVAEGLVSKSNESEDLEHIGIQYFQE
LLSRSFFQDVEEYRSVFTSLCKLHDLVHDLALSAAGVEFCTVNSHTQIISDEARHVAFSD
YDLSAAELPASLLNNQTLRTISFSVDGVGPMSTMFIENCIARFVQLRVLDISHSCFDELP
RSVGELKYLRYLDINSNGSIKELPDSINKLLSLQTLRLSHCAQLEGLPKDIGNLISLRHL
HITTKQTCFPDKAIGCLSSLRSLYIHSCTNLVSLSEGLQYLTSLRTLAIIGCPRLTFFPS
TMKHLTALENLLIVDCEELTLLEWQDIEGLRMIRSLVIGGLPELESKDVQRLGNLQMLVL
AGLPQLVALPRWLEGASATLQYLRVERCPNFAALPKWLENLIALEKLEISKCGKLSSLPE
GMSCLTNLKPFASDNHVKHVASSQPELIEPGSLYTPSKEKLKGSGKLMVPSDLEPREYMI
KRKGSLDVTDKVTAM

Transcript Sequence

Gene sequence data has not been registered.